Archer x Noir 1 linkage map

The Archer x Noir 1 linkage map consists of 23 linkage groups as listed below.  These linkage groups are analogous to the Minsoy X Noir 1 linkage groups except u4 which has been divided into u4a and u4b due to ambiguities.  Click on any of the linkage group names to jump to the detailed listing of the linkage group.  Last updated 10-31-97, the map now covers 2400 cM with 344 markers.
 

u1
 105.1cM
u2 52.5cM
u3 214.7cM
u4a 25.4cM
u4b 52.1cM
u5 119.7cM
u6 117.3cM
u7 89.8cM
u8 92.4cM
u9 188.4cM
u10 126.7cM
u11 148.5cM
u12 109.1cM
u13 199cM
u14 137.1cM
u17 133.9cM
u18 11.4cM
u19 123.7cM
u21 118.8cM
u22 22.7cM
u24 81.8cM
u26 68.5cM
u28 61.9cM
 
u1
 Pairwise linkage Genome position
Satt287 6.8 0
Satt285 0.3 6.8
Sct_046 42.8 7.1
K011f 5.8 49.9
BL049b 0 55.7
Satt280 0.6 55.7
Satt183 1.3 56.3
A109h 1.7 57.6
Sct_001 34.4 59.3
Sctt011 6.8 93.7
K375 1.8 100.5
R189 2.5 102.3
L050i - 104.8
linkage group length 105.1cM -
u2 Pairwise linkage Genome position
Satt573 8.3 104.8
K274 1.9 113.1
G214c 0.8 115
G214z 0.2 115.8
A510b 0.6 116
Satt263 0 116.6
Satt045 0.3 116.6
BL049a 0.4 116.9
R028 37.2 117.3
Satt553 2.7 154.5
Satt231 - 157.2
linkage group length 52.5cM -
u3 Pairwise linkage Genome position
Satt390 8.7 157.2
Sct_067 21.4 165.9
Satt207 30 187.3
Satt315 3.6 217.3
T153a 0 220.9
B172 2.4 220.9
Satt187 3.1 223.3
GMENOD2B 2.4 226.4
Satt424 7.6 228.8
A111a 10.6 236.4
Sat_115 5.5 247
Satt089 41.9 252.5
Satt329 24.4 294.4
Satt158 0 318.8
Satt102B 2.2 318.8
Sat_131b 1.4 321
Satt333 30.3 322.4
Satt409 7.9 352.7
Satt228 0.5 360.6
L144 10.8 361.1
Satt378 - 371.9
linkage group length 214.7cM -
u4a Pairwise linkage Genome position
T028 25.4 371.9
Satt509 - 397.3
linkage group length 25.4cM -
u4b Pairwise linkage Genome position
Satt298 8.1 397.3
Satt597 3.6 405.4
Sct_026 0.2 409
G214e 2.9 409.2
Sat_095 18.2 412.1
Satt359 0.2 430.3
Sat_123 16.1 430.5
Satt484 2.8 446.6
Satt453 - 449.4
linkage group length 52.1cM -
u5 Pairwise linkage Genome position
Satt275 0 449.4
Satt163 0.7 449.4
Satt038 12.3 450.1
Satt570 14.2 462.4
Satt130 8.1 476.6
Sat_131 0.9 484.7
Satt324 11.1 485.6
L156 3.4 496.7
R017 2.4 500.1
L050b 5.8 502.5
Satt303 1.7 508.3
Satt138 5.9 510
Satt199 0.2 515.9
G214f 7.1 516.1
Satt012 6.7 523.2
Satt288 25.6 529.9
Satt472 0.8 555.5
L002a 0.1 556.3
A235a 1.8 556.4
Sat_117 1.7 558.2
Sat_043 2.9 559.9
Sct_187 0.5 562.8
A378 0.2 563.3
Sat_064 5.6 563.5
L050j - 569.1
linkage group length 119.7cM -
u6 Pairwise linkage Genome position
Satt152 9.1 569.1
L050k 1 578.2
BL004 9.1 579.2
Satt159 13.9 588.3
Sat_084 1.9 602.2
Satt485 1.3 604.1
Satt125 5.3 605.4
Satt080 2.9 610.7
L103a 0 613.6
B162 33.8 613.6
Satt237 3.5 647.4
Sat_091 5.8 650.9
G214g 0 656.7
Satt234 7.8 656.7
Satt257 6.3 664.5
Sat_125 14.4 670.8
A363a 1.1 685.2
A455 - 686.3
linkage group length 117.3cM -
u7 Pairwise linkage Genome position
Satt276 10.1 686.3
Satt449 0 696.4
Satt042 3.7 696.4
Satt591 1.9 700.1
Satt155 2.4 702
G214h 7.6 704.4
R183 4.3 712
Satt050 9.5 716.3
T153b 5.2 725.8
NOD26A 0.5 731
Satt385 0.6 731.5
BL053b 3.7 732.1
Satt545 3.5 735.8
A975a 10.8 739.3
Satt599 2.4 750.1
Satt174 8.8 752.5
Satt211 14.4 761.3
Satt200 - 775.7
linkage group length 89.8cM -
u8 Pairwise linkage Genome position
Satt184 23.3 775.7
R013 9.2 799
R249b 1.9 808.2
K227 1.4 810.1
Satt032 1.6 811.5
Satt169 2.4 813.1
A109g 1.5 815.5
A235b 0 817
Satt295 0 817
A109d 2.7 817
NP008 0.7 819.7
Satt203 4 820.4
Sat_110 7 824.4
Satt436 17.9 831.4
A295 12.3 849.3
Satt071 5.5 861.6
Satt147 0.4 867.1
L058 0.5 867.5
Satt129 - 868
linkage group length 92.4cM -
u9 Pairwise linkage Genome position
A121 24.6 868
L199a 11.3 892.6
Sat_062 7.5 903.9
Satt432 1.3 911.4
Satt281 4 912.7
A109f 10.8 916.7
Satt291 34.2 927.5
Satt305 19.5 961.7
L059 14.2 981.2
Sat_076 1 995.4
Satt363 2.6 996.4
Satt286 0.8 999
BL032a 3.8 999.8
Satt277 5.6 1003.6
Satt489 21.4 1009.2
Sct_028 3.5 1030.6
Satt433 0.9 1034.1
Satt316 7.3 1035
Satt372B 10.8 1042.3
Satt371 3.5 1053.1
Satt357 - 1056.6
linkage group length 188.4cM -
u10 Pairwise linkage Genome position
L185 2 1056.6
A141b 2 1058.6
Satt353 2 1060.6
A381 29.4 1062.6
Satt192 12.2 1092
Sctt009 8.1 1104.2
BL046 58.4 1112.3
Satt181 0 1170.7
Satt317 4.9 1170.7
Satt142 7.6 1175.6
Satt302 - 1183.2
linkage group length 126.7cM -
u11 Pairwise linkage Genome position
Satt404 2.1 1183.2
GMSC514 1.7 1185.3
Satt590 8.9 1187
Satt201 27.1 1195.9
Satt540 2.4 1223
R079 12.9 1225.4
Satt463 1.7 1238.3
Satt245 11.9 1240
Sat_003 13.1 1251.9
Satt175 6.3 1265
Sct_147 6.8 1271.3
Satt306 19.8 1278.1
M121 7.6 1297.9
Sat_121 1.7 1305.5
Satt571b 3 1307.2
Satt346 1.9 1310.2
Satt210 16.7 1312.1
Satt308 3 1328.8
Satt336 - 1331.8
linkage group length 148.5cM -
u12 Pairwise linkage Genome position
A124 4.3 1331.8
Satt135 14.4 1336.1
Satt372 6.7 1350.5
Satt002 4.2 1357.2
Satt582 7.2 1361.4
Sat_092 35.8 1368.6
Fr2 1.5 1404.4
Satt543 0.2 1405.9
Satt226 0 1406.1
Satt082 4.3 1406.1
Sat_001 0.7 1410.4
Satt301 6.6 1411.1
GMHSP179 1.9 1417.7
L204c 3 1419.6
Satt186 11.6 1422.6
Satt031 0.1 1434.2
Sat_022 0 1434.3
A141a 6.5 1434.3
Satt386 - 1440.8
linkage group length 109.1cM -
u13 Pairwise linkage Genome position
Satt176 0.2 1440.8
Satt040 15 1441
Satt252 4.2 1456
Satt423 4.8 1460.2
W1 4.3 1465
Satt160 4.2 1469.3
Sat_039 48.9 1473.5
Sat_133 23.2 1522.4
L063 1.5 1545.6
BL053h 1 1547.1
HSP176 2.5 1548.1
R045 0.6 1550.6
L050n 3.1 1551.2
Sat_120 0.4 1554.3
Sct_033 1.7 1554.7
Satt335 9.2 1556.4
Sct_188 0 1565.6
Satt072 12.1 1565.6
Satt490 3.3 1577.7
Satt144 36.6 1581
Sat_090 22.2 1617.6
Satt395 - 1639.8
linkage group length 199cM -
u14 Pairwise linkage Genome position
Satt495 24.6 1639.8
Sat_071 16 1664.4
Satt523 0.9 1680.4
B124a 0 1681.3
A459 4.2 1681.3
A204 1.5 1685.5
G214l 3.5 1687
Satt462 20.5 1690.5
Satt481 0.4 1711
Satt156 3.6 1711.4
Sct_010 0.8 1715
Satt076 5.6 1715.8
Sat_113 7 1721.4
Satt166 24.4 1728.4
Satt006 2.4 1752.8
A489 5.4 1755.2
K385 8.2 1760.6
G214u 7.9 1768.8
Satt373 - 1776.7
linkage group length 137.1cM -
u17 Pairwise linkage Genome position
BL053d 13.6 1776.7
Satt571 2.9 1790.3
Satt419 9 1793.2
Satt367 7.1 1802.2
A352b 0.4 1809.3
L204b 0.3 1809.7
BL002 5.1 1810
A109e 23.1 1815.1
Sat_105 21.9 1838.2
Sat_104 10.9 1860.1
Satt292 14.4 1871
GMGLPSI2 2.7 1885.4
Satt148 16.3 1888.1
Satt440 2.4 1904.4
L050f 3.9 1906.8
K011d - 1910.7
linkage group length 133.9cM -
u18 Pairwise linkage Genome position
Sat_112 3.5 1910.7
Satt411 7.8 1914.2
A053a 0 1922
L194a - 1922
linkage group length 11.4cM -
u19 Pairwise linkage Genome position
Sat_096 38 1922
Satt095 6.3 1960
Satt157 5.4 1966.3
Satt558 9.5 1971.7
Satt296 22.3 1981.2
Satt005 2.2 2003.5
Satt141 0 2005.7
K011b 7.6 2005.7
Satt041 2.8 2013.3
Satt546 7.4 2016.1
L050l 10.6 2023.5
Sat_069 11.5 2034.1
Satt274 - 2045.6
linkage group length 123.7cM -
u21 Pairwise linkage Genome position
Sat_132 5.9 2045.6
Satt500 25.9 2051.5
G214o 2.8 2077.4
Satt259 16.6 2080.2
K011e 2.8 2096.8
Satt188 0.4 2099.6
Satt550 0.3 2100
Satt094 0.3 2100.3
Satt173 0 2100.6
Sat_110B 10.2 2100.6
Satt563 2.1 2110.8
Satt478 7.8 2112.9
Satt477 4.4 2120.7
Satt123 14.8 2125.1
Satt592 4.5 2139.9
Satt581 13.4 2144.4
Satt153 6.5 2157.8
Sat_108 - 2164.3
linkage group length 118.8cM -
u22 Pairwise linkage Genome position
Sct_186 0.1 2164.3
SOYGPATR 22.6 2164.4
K001 - 2187
linkage group length 22.7cM -
u24 Pairwise linkage Genome position
Satt242 12.3 2187
Satt102 0.5 2199.3
A315 19.6 2199.8
Satt046 0.4 2219.4
Satt337 1.2 2219.8
G214v 1.5 2221
Satt326 3.5 2222.5
Satt240 2.4 2226
Satt559 1.2 2228.4
Satt273 23.3 2229.6
Satt260 5.3 2252.9
BL053i 9 2258.2
A661 1.8 2267.2
Satt196 - 2269
linkage group length 81.8cM -
u26 Pairwise linkage Genome position
G214w 0 2269
A352a 24.4 2269
Sct_034 3.2 2293.4
Satt168 2.2 2296.6
Satt416 8.6 2298.8
Satt304 5.2 2307.4
Satt070 0.4 2312.6
BL057 4.9 2313
Satt066 10.1 2317.9
Satt534 6.2 2328
Satt063 3.4 2334.2
Satt560 - 2337.6
linkage group length 68.5cM -
u28 Pairwise linkage Genome position
G214y 0 2337.6
Sat_085 0 2337.6
Sat_077 1.1 2337.6
Satt136 50.4 2338.7
Satt338 1.5 2389.1
Satt180 8.7 2390.6
L175 - 2399.3
linkage group length 61.9cM -
 

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